STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prf1Hypothetical protein; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA. (413 aa)    
Predicted Functional Partners:
EQB66763.1
Hypothetical protein; UNLEPL_C00003G00320; UNLEPL_15243G0320.
  
 
 0.999
tuf
Hypothetical protein; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
  
 0.988
EQB66506.1
Methyltransferase; UNLEPL_C00003G00063; UNLEPL_15243G0063.
    
 0.944
rpl15e
Hypothetical protein; UNLEPL_C00003G00261; UNLEPL_15243G0261; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 
 0.944
rps3ae
Hypothetical protein; UNLEPL_C00003G00737; UNLEPL_15243G0737; Belongs to the eukaryotic ribosomal protein eS1 family.
  
  0.941
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
   
  0.939
rps3
Hypothetical protein; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 
 0.935
rps6e
Hypothetical protein; UNLEPL_C00003G00428; UNLEPL_15243G0428; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 
 0.933
rps4e
Hypothetical protein; UNLEPL_C00003G00463; UNLEPL_15243G0463; Belongs to the eukaryotic ribosomal protein eS4 family.
  
  0.919
rplP0
Acidic ribosomal protein P0; UNLEPL_C00003G00113; UNLEPL_15243G0113.
  
  0.907
Your Current Organism:
Thermoplasmatales archaeon Eplasma
NCBI taxonomy Id: 667137
Other names: T. archaeon E-plasma, Thermoplasmatales archaeon E-plasma
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.