STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB67409.1Hypothetical protein; UNLEPL_C00002G00245; UNLEPL_17965G0245. (252 aa)    
Predicted Functional Partners:
EQB66462.1
Hypothetical protein; UNLEPL_C00003G00019; UNLEPL_15243G0019.
  
 0.998
eif1a
Hypothetical protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
 
 
 0.996
rps3
Hypothetical protein; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.993
rps11
Hypothetical protein; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family.
  
 
 0.993
rps6e
Hypothetical protein; UNLEPL_C00003G00428; UNLEPL_15243G0428; Belongs to the eukaryotic ribosomal protein eS6 family.
 
  0.991
rps5
Hypothetical protein; With S4 and S12 plays an important role in translational accuracy.
  
 
 0.991
rps3ae
Hypothetical protein; UNLEPL_C00003G00737; UNLEPL_15243G0737; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 
 0.988
rps19p
Hypothetical protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
    
  0.986
EQB67435.1
Hypothetical protein; UNLEPL_C00002G00271; UNLEPL_17965G0271.
  
  0.984
rps4
Hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
   
  0.981
Your Current Organism:
Thermoplasmatales archaeon Eplasma
NCBI taxonomy Id: 667137
Other names: T. archaeon E-plasma, Thermoplasmatales archaeon E-plasma
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.