STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysSHypothetical protein; UNLEPL_C00003G00095; UNLEPL_15243G0095; Belongs to the class-I aminoacyl-tRNA synthetase family. (494 aa)    
Predicted Functional Partners:
EQB66537.1
Hypothetical protein; UNLEPL_C00003G00094; UNLEPL_15243G0094; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.960
EQB66536.1
Hypothetical protein; UNLEPL_C00003G00093; UNLEPL_15243G0093.
       0.809
EQB66539.1
Hypothetical protein; UNLEPL_C00003G00096; UNLEPL_15243G0096; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
   
 0.691
spt5
Transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.
  
    0.689
EQB67356.1
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
 
     0.482
EQB67711.1
Hypothetical protein; UNLEPL_C00002G00547; UNLEPL_17965G0547; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.480
tyrS
Hypothetical protein; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 4 subfamily.
   
  
 0.473
EQB67362.1
Membrane metalloprotease; UNLEPL_C00002G00198; UNLEPL_17965G0198.
 
     0.472
serS
Hypothetical protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
  
    0.429
EQB67431.1
Hypothetical protein; UNLEPL_C00002G00267; UNLEPL_17965G0267; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.423
Your Current Organism:
Thermoplasmatales archaeon Eplasma
NCBI taxonomy Id: 667137
Other names: T. archaeon E-plasma, Thermoplasmatales archaeon E-plasma
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.