STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB66974.1rRNA methylase; UNLEPL_C00003G00531; UNLEPL_15243G0531. (243 aa)    
Predicted Functional Partners:
EQB66973.1
Hypothetical protein; UNLEPL_C00003G00530; UNLEPL_15243G0530.
       0.959
EQB67494.1
Hypothetical protein; UNLEPL_C00002G00330; UNLEPL_17965G0330.
    
  0.754
rlmE
Hypothetical protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
  
   
 0.682
rpl13
Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
     
 0.677
rpl18e
Hypothetical protein; UNLEPL_C00003G00532; UNLEPL_15243G0532; Belongs to the eukaryotic ribosomal protein eL18 family.
 
     0.657
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
 
  
 0.637
rps9
30S ribosomal protein S9P; UNLEPL_C00003G00534; UNLEPL_15243G0534; Belongs to the universal ribosomal protein uS9 family.
       0.603
thiI
Hypothetical protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
      
 0.586
cysS
Hypothetical protein; UNLEPL_C00002G00332; UNLEPL_17965G0332; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
  0.568
EQB67548.1
Dimethyladenosine transferase; UNLEPL_C00002G00384; UNLEPL_17965G0384; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
 
   
 0.544
Your Current Organism:
Thermoplasmatales archaeon Eplasma
NCBI taxonomy Id: 667137
Other names: T. archaeon E-plasma, Thermoplasmatales archaeon E-plasma
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.