STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps8e30S ribosomal protein S8e; UNLEPL_C00003G00677; UNLEPL_15243G0677. (125 aa)    
Predicted Functional Partners:
rpl37e
Hypothetical protein; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.
  
 
 0.999
rpl7ae
Hypothetical protein; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
  
 
 0.999
EQB67470.1
Hypothetical protein; UNLEPL_C00002G00306; UNLEPL_17965G0306.
   
 
 0.999
rpl21e
50S ribosomal protein L21e; UNLEPL_C00002G00387; UNLEPL_17965G0387; Belongs to the eukaryotic ribosomal protein eL21 family.
  
 
 0.999
rplP0
Acidic ribosomal protein P0; UNLEPL_C00003G00113; UNLEPL_15243G0113.
  
 
 0.999
rpl15e
Hypothetical protein; UNLEPL_C00003G00261; UNLEPL_15243G0261; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 
 0.999
rpl3
Hypothetical protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.999
rpl23
50S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.
   
 
 0.999
rpl22
Hypothetical protein; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
  
 
 0.999
rpmC
50S ribosomal protein L29P; UNLEPL_C00003G00457; UNLEPL_15243G0457; Belongs to the universal ribosomal protein uL29 family.
  
 
 0.999
Your Current Organism:
Thermoplasmatales archaeon Eplasma
NCBI taxonomy Id: 667137
Other names: T. archaeon E-plasma, Thermoplasmatales archaeon E-plasma
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.