STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EQB66270.1Peptidylprolyl isomerase FKBP-type; UNLIPL_C00001G00436; UNLIPL_13606G0436. (263 aa)    
Predicted Functional Partners:
EQB66277.1
Hypothetical protein; UNLIPL_C00001G00443; UNLIPL_13606G0443.
  
   0.948
EQB65208.1
RNA methyltransferase; UNLIPL_C00003G00060; UNLIPL_13249G0060.
 
     0.905
rps3
Hypothetical protein; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
 
   0.905
rps3ae
Hypothetical protein; UNLIPL_C00001G00213; UNLIPL_13606G0213; Belongs to the eukaryotic ribosomal protein eS1 family.
  
    0.848
prf1
Hypothetical protein; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
       0.768
fusA
Hypothetical protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
  
    0.704
rps28e
Hypothetical protein; UNLIPL_C00004G00498; UNLIPL_15911G0498; Belongs to the eukaryotic ribosomal protein eS28 family.
 
    0.704
rps5
Hypothetical protein; With S4 and S12 plays an important role in translational accuracy.
 
  
 0.700
rpl15
Hypothetical protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
 
    0.695
rps12
Hypothetical protein; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
   
  
 0.670
Your Current Organism:
Thermoplasmatales archaeon Iplasma
NCBI taxonomy Id: 667138
Other names: T. archaeon I-plasma, Thermoplasmatales archaeon I-plasma
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.