STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI70086.1H+/Cl-antiporter ClcA. (605 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
 
 0.978
SEJ93581.1
Internalin A.
  
 0.975
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
 0.929
SEK13118.1
Serine transporter.
   
 0.875
SEI70109.1
Transcriptional regulator, MarR family.
 
     0.849
SEJ94857.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
  
    0.840
SEI98570.1
Dihydrolipoamide dehydrogenase.
  
 
 0.838
SEK12301.1
Dihydrolipoamide dehydrogenase.
  
 
 0.838
SEI56329.1
Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
    
 0.822
SEK06222.1
Protein phosphatase 2C.
 
  
 0.821
Your Current Organism:
Paraburkholderia diazotrophica
NCBI taxonomy Id: 667676
Other names: BCRC 80259, Burkholderia diazotrophica, Burkholderia diazotrophica Sheu et al. 2013, Burkholderia sp. DPU-3, Burkholderia sp. JPY359, Burkholderia sp. JPY389, Burkholderia sp. JPY461, Burkholderia sp. NKMU-JPY359, Burkholderia sp. NKMU-JPY389, Burkholderia sp. NKMU-JPY461, Burkholderia sp. STM4206, KCTC 23308, LMG 26031, LMG:26031, NKMU JPY461, NKMU-JPY461, P. diazotrophica, Paraburkholderia diazotrophica (Sheu et al. 2013) Sawana et al. 2015, strain JPY461
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