STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ40910.1Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain. (326 aa)    
Predicted Functional Partners:
SEK12048.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
  
     0.658
SEJ96563.1
Transcriptional regulator, AraC family with amidase-like domain.
  
     0.607
SEJ96513.1
Transcriptional regulator, AraC family.
  
     0.585
SEJ40942.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
    0.567
SEK07155.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
  
     0.550
SEJ37951.1
AraC family transcriptional regulator, activator of mtrCDE.
  
   0.530
SEJ03273.1
Transcriptional regulator, AraC family.
  
   0.529
SEJ80979.1
Dihydrofolate reductase.
  
    0.516
SEJ09205.1
Transcriptional regulator, AraC family.
  
   0.510
SEJ03295.1
Catechol 2,3-dioxygenase.
  
     0.473
Your Current Organism:
Paraburkholderia diazotrophica
NCBI taxonomy Id: 667676
Other names: BCRC 80259, Burkholderia diazotrophica, Burkholderia diazotrophica Sheu et al. 2013, Burkholderia sp. DPU-3, Burkholderia sp. JPY359, Burkholderia sp. JPY389, Burkholderia sp. JPY461, Burkholderia sp. NKMU-JPY359, Burkholderia sp. NKMU-JPY389, Burkholderia sp. NKMU-JPY461, Burkholderia sp. STM4206, KCTC 23308, LMG 26031, LMG:26031, NKMU JPY461, NKMU-JPY461, P. diazotrophica, Paraburkholderia diazotrophica (Sheu et al. 2013) Sawana et al. 2015, strain JPY461
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