Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI43438.1 | SEI70086.1 | SAMN05192539_1001372 | SAMN05192539_1003331 | Anti-sigma factor, TIGR02949 family. | H+/Cl-antiporter ClcA. | 0.579 |
SEI43438.1 | SEJ52375.1 | SAMN05192539_1001372 | SAMN05192539_1012144 | Anti-sigma factor, TIGR02949 family. | Acid phosphatase. | 0.610 |
SEI43438.1 | SEJ82112.1 | SAMN05192539_1001372 | SAMN05192539_101990 | Anti-sigma factor, TIGR02949 family. | Transcriptional regulator, MarR family. | 0.416 |
SEI55379.1 | SEJ82112.1 | SAMN05192539_1002300 | SAMN05192539_101990 | PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family. | Transcriptional regulator, MarR family. | 0.583 |
SEI70086.1 | SEI43438.1 | SAMN05192539_1003331 | SAMN05192539_1001372 | H+/Cl-antiporter ClcA. | Anti-sigma factor, TIGR02949 family. | 0.579 |
SEI70086.1 | SEJ52375.1 | SAMN05192539_1003331 | SAMN05192539_1012144 | H+/Cl-antiporter ClcA. | Acid phosphatase. | 0.507 |
SEI70086.1 | SEJ66228.1 | SAMN05192539_1003331 | SAMN05192539_101526 | H+/Cl-antiporter ClcA. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.507 |
SEI70086.1 | SEJ82112.1 | SAMN05192539_1003331 | SAMN05192539_101990 | H+/Cl-antiporter ClcA. | Transcriptional regulator, MarR family. | 0.636 |
SEI96730.1 | SEJ78061.1 | SAMN05192539_1005229 | SAMN05192539_101837 | Hypothetical protein. | Protein of unknown function. | 0.568 |
SEI96730.1 | SEJ82112.1 | SAMN05192539_1005229 | SAMN05192539_101990 | Hypothetical protein. | Transcriptional regulator, MarR family. | 0.478 |
SEJ52375.1 | SEI43438.1 | SAMN05192539_1012144 | SAMN05192539_1001372 | Acid phosphatase. | Anti-sigma factor, TIGR02949 family. | 0.610 |
SEJ52375.1 | SEI70086.1 | SAMN05192539_1012144 | SAMN05192539_1003331 | Acid phosphatase. | H+/Cl-antiporter ClcA. | 0.507 |
SEJ52375.1 | SEJ66228.1 | SAMN05192539_1012144 | SAMN05192539_101526 | Acid phosphatase. | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | 0.665 |
SEJ52375.1 | SEJ82112.1 | SAMN05192539_1012144 | SAMN05192539_101990 | Acid phosphatase. | Transcriptional regulator, MarR family. | 0.450 |
SEJ66228.1 | SEI70086.1 | SAMN05192539_101526 | SAMN05192539_1003331 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | H+/Cl-antiporter ClcA. | 0.507 |
SEJ66228.1 | SEJ52375.1 | SAMN05192539_101526 | SAMN05192539_1012144 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Acid phosphatase. | 0.665 |
SEJ66228.1 | SEJ82112.1 | SAMN05192539_101526 | SAMN05192539_101990 | NRAMP (natural resistance-associated macrophage protein) metal ion transporters. | Transcriptional regulator, MarR family. | 0.557 |
SEJ78061.1 | SEI96730.1 | SAMN05192539_101837 | SAMN05192539_1005229 | Protein of unknown function. | Hypothetical protein. | 0.568 |
SEJ78061.1 | SEJ82112.1 | SAMN05192539_101837 | SAMN05192539_101990 | Protein of unknown function. | Transcriptional regulator, MarR family. | 0.511 |
SEJ82112.1 | SEI43438.1 | SAMN05192539_101990 | SAMN05192539_1001372 | Transcriptional regulator, MarR family. | Anti-sigma factor, TIGR02949 family. | 0.416 |
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