STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ83637.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
SEJ83648.1
Hypothetical protein.
       0.773
SEJ66030.1
Oxidoreductase-like protein, N-terminal.
  
     0.537
SEJ16251.1
Tellurite resistance protein TerB.
  
     0.528
SEJ71096.1
Membrane protein, MarC family.
 
    0.516
SEK10902.1
Hypothetical protein.
  
     0.474
SEJ44903.1
Hypothetical protein.
  
     0.455
SEJ15675.1
Multiple antibiotic resistance protein.
  
    0.452
SEJ81364.1
Multiple antibiotic resistance protein.
  
    0.452
SEK03471.1
Multiple antibiotic resistance protein.
  
    0.452
Your Current Organism:
Paraburkholderia diazotrophica
NCBI taxonomy Id: 667676
Other names: BCRC 80259, Burkholderia diazotrophica, Burkholderia diazotrophica Sheu et al. 2013, Burkholderia sp. DPU-3, Burkholderia sp. JPY359, Burkholderia sp. JPY389, Burkholderia sp. JPY461, Burkholderia sp. NKMU-JPY359, Burkholderia sp. NKMU-JPY389, Burkholderia sp. NKMU-JPY461, Burkholderia sp. STM4206, KCTC 23308, LMG 26031, LMG:26031, NKMU JPY461, NKMU-JPY461, P. diazotrophica, Paraburkholderia diazotrophica (Sheu et al. 2013) Sawana et al. 2015, strain JPY461
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.