Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI43755.1 | SEI43770.1 | SAMN05192539_1001393 | SAMN05192539_1001394 | Homoserine dehydrogenase. | L-threonine synthase. | 0.988 |
SEI43755.1 | SEI44592.1 | SAMN05192539_1001393 | SAMN05192539_1001442 | Homoserine dehydrogenase. | Cystathionine beta-lyase. | 0.954 |
SEI43755.1 | SEI53571.1 | SAMN05192539_1001393 | SAMN05192539_1002220 | Homoserine dehydrogenase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.950 |
SEI43755.1 | SEI69247.1 | SAMN05192539_1001393 | SAMN05192539_1003301 | Homoserine dehydrogenase. | Serine O-acetyltransferase. | 0.925 |
SEI43755.1 | SEI95993.1 | SAMN05192539_1001393 | SAMN05192539_1005199 | Homoserine dehydrogenase. | Serine O-acetyltransferase. | 0.923 |
SEI43755.1 | SEJ53559.1 | SAMN05192539_1001393 | SAMN05192539_1012198 | Homoserine dehydrogenase. | O-acetylhomoserine sulfhydrylase. | 0.937 |
SEI43755.1 | ahcY | SAMN05192539_1001393 | SAMN05192539_102967 | Homoserine dehydrogenase. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.911 |
SEI43755.1 | ilvE | SAMN05192539_1001393 | SAMN05192539_100877 | Homoserine dehydrogenase. | Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.958 |
SEI43755.1 | metE | SAMN05192539_1001393 | SAMN05192539_102769 | Homoserine dehydrogenase. | Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.957 |
SEI43755.1 | thrB | SAMN05192539_1001393 | SAMN05192539_102867 | Homoserine dehydrogenase. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.980 |
SEI43770.1 | SEI43755.1 | SAMN05192539_1001394 | SAMN05192539_1001393 | L-threonine synthase. | Homoserine dehydrogenase. | 0.988 |
SEI43770.1 | SEI44592.1 | SAMN05192539_1001394 | SAMN05192539_1001442 | L-threonine synthase. | Cystathionine beta-lyase. | 0.511 |
SEI43770.1 | SEI69247.1 | SAMN05192539_1001394 | SAMN05192539_1003301 | L-threonine synthase. | Serine O-acetyltransferase. | 0.437 |
SEI43770.1 | SEI95993.1 | SAMN05192539_1001394 | SAMN05192539_1005199 | L-threonine synthase. | Serine O-acetyltransferase. | 0.437 |
SEI43770.1 | ilvE | SAMN05192539_1001394 | SAMN05192539_100877 | L-threonine synthase. | Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.614 |
SEI43770.1 | metE | SAMN05192539_1001394 | SAMN05192539_102769 | L-threonine synthase. | Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.584 |
SEI43770.1 | thrB | SAMN05192539_1001394 | SAMN05192539_102867 | L-threonine synthase. | Homoserine kinase; Belongs to the pseudomonas-type ThrB family. | 0.974 |
SEI44592.1 | SEI43755.1 | SAMN05192539_1001442 | SAMN05192539_1001393 | Cystathionine beta-lyase. | Homoserine dehydrogenase. | 0.954 |
SEI44592.1 | SEI43770.1 | SAMN05192539_1001442 | SAMN05192539_1001394 | Cystathionine beta-lyase. | L-threonine synthase. | 0.511 |
SEI44592.1 | SEI53571.1 | SAMN05192539_1001442 | SAMN05192539_1002220 | Cystathionine beta-lyase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.937 |
page 1 of 5