STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK10608.1Glycine/D-amino acid oxidase. (374 aa)    
Predicted Functional Partners:
SEK10617.1
Thioredoxin reductase.
 0.974
SEJ39602.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
 
 0.967
SEK05458.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
  
 0.963
SEK10455.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.963
SEK10612.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 
  0.954
SEK11062.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 0.889
SEJ59091.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 0.888
SEJ06942.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 
  0.821
SEK05992.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
 
  0.805
SEK01506.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
 
  
  0.801
Your Current Organism:
Paraburkholderia diazotrophica
NCBI taxonomy Id: 667676
Other names: BCRC 80259, Burkholderia diazotrophica, Burkholderia diazotrophica Sheu et al. 2013, Burkholderia sp. DPU-3, Burkholderia sp. JPY359, Burkholderia sp. JPY389, Burkholderia sp. JPY461, Burkholderia sp. NKMU-JPY359, Burkholderia sp. NKMU-JPY389, Burkholderia sp. NKMU-JPY461, Burkholderia sp. STM4206, KCTC 23308, LMG 26031, LMG:26031, NKMU JPY461, NKMU-JPY461, P. diazotrophica, Paraburkholderia diazotrophica (Sheu et al. 2013) Sawana et al. 2015, strain JPY461
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