STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_17315Uncharacterized protein. (56 aa)    
Predicted Functional Partners:
SARC_06789
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.816
SARC_07903
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.742
SARC_02104
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.644
SARC_17910
ATPase_AAA_core domain-containing protein.
   
  0.505
SARC_17814
ATPase_AAA_core domain-containing protein; Belongs to the AAA ATPase family.
   
  0.505
SARC_17614
ATPase_AAA_core domain-containing protein; Belongs to the AAA ATPase family.
   
  0.505
SARC_17365
ATPase_AAA_core domain-containing protein.
   
  0.505
SARC_17197
Uncharacterized protein.
   
  0.505
SARC_12494
AAA_lid_3 domain-containing protein.
   
  0.505
SARC_11799
Uncharacterized protein.
   
  0.505
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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