SARC_17323 protein (Sphaeroforma arctica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SARC_17323

Uncharacterized protein. (59 aa)

Predicted Functional Partners:

SARC_16118

0.822

SARC_01965

0.822

SARC_12204

0.595

SARC_08748

0.595

SARC_08017

0.595

SARC_01082

0.595

SARC_05369

0.589

SARC_01297

0.589

SARC_14386

0.557

SARC_02508

0.557

Your Current Organism:

Sphaeroforma arctica

NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SARC_01082	SARC_01297	A0A0L0GD01	A0A0L0GCF3	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.715
SARC_01082	SARC_01965	A0A0L0GD01	A0A0L0GAE6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.755
SARC_01082	SARC_05369	A0A0L0GD01	A0A0L0FZS7	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.715
SARC_01082	SARC_16118	A0A0L0GD01	A0A0L0F404	Uncharacterized protein.	Protein kinase domain-containing protein.	0.755
SARC_01082	SARC_17323	A0A0L0GD01	A0A0L0F1W0	Uncharacterized protein.	Uncharacterized protein.	0.595
SARC_01297	SARC_01082	A0A0L0GCF3	A0A0L0GD01	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Uncharacterized protein.	0.715
SARC_01297	SARC_01965	A0A0L0GCF3	A0A0L0GAE6	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Protein kinase domain-containing protein.	0.705
SARC_01297	SARC_02508	A0A0L0GCF3	A0A0L0G8P3	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Uncharacterized protein.	0.643
SARC_01297	SARC_08017	A0A0L0GCF3	A0A0L0FSB2	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Calmodulin; Belongs to the calmodulin family.	0.715
SARC_01297	SARC_08748	A0A0L0GCF3	A0A0L0FQL0	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Myosin light chain 1/3/4/6, alkali.	0.715
SARC_01297	SARC_12204	A0A0L0GCF3	A0A0L0FFL6	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Uncharacterized protein.	0.715
SARC_01297	SARC_14386	A0A0L0GCF3	A0A0L0FAC2	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Uncharacterized protein.	0.643
SARC_01297	SARC_16118	A0A0L0GCF3	A0A0L0F404	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Protein kinase domain-containing protein.	0.705
SARC_01297	SARC_17323	A0A0L0GCF3	A0A0L0F1W0	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Uncharacterized protein.	0.589
SARC_01965	SARC_01082	A0A0L0GAE6	A0A0L0GD01	Protein kinase domain-containing protein.	Uncharacterized protein.	0.755
SARC_01965	SARC_01297	A0A0L0GAE6	A0A0L0GCF3	Protein kinase domain-containing protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.705
SARC_01965	SARC_02508	A0A0L0GAE6	A0A0L0G8P3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.693
SARC_01965	SARC_05369	A0A0L0GAE6	A0A0L0FZS7	Protein kinase domain-containing protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.705
SARC_01965	SARC_08017	A0A0L0GAE6	A0A0L0FSB2	Protein kinase domain-containing protein.	Calmodulin; Belongs to the calmodulin family.	0.755
SARC_01965	SARC_08748	A0A0L0GAE6	A0A0L0FQL0	Protein kinase domain-containing protein.	Myosin light chain 1/3/4/6, alkali.	0.755