STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_17053Uncharacterized protein. (52 aa)    
Predicted Functional Partners:
SARC_00056
GP-PDE domain-containing protein.
   
 0.746
SARC_00057
Uncharacterized protein.
   
 0.731
SARC_01468
AB hydrolase-1 domain-containing protein.
  
 0.710
SARC_01466
AB hydrolase-1 domain-containing protein.
  
 0.710
SARC_07253
PlsC domain-containing protein.
  
 
 0.708
SARC_02502
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.698
SARC_10500
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
    
 0.675
SARC_06388
Uncharacterized protein.
  
 0.674
SARC_03408
Cytochrome b5 heme-binding domain-containing protein.
   
 0.674
SARC_01830
Tafazzin family protein; Belongs to the taffazin family.
   
 
 0.668
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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