STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_16237Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
SARC_01860
Uncharacterized protein.
    
 
 0.864
SARC_07034
BZIP domain-containing protein.
    
 0.775
SARC_06874
TAF4 domain-containing protein.
    
 0.760
SARC_05586
TAF4 domain-containing protein.
    
 0.760
SARC_06639
Uncharacterized protein.
   
 0.758
SARC_06170
Uncharacterized protein.
    
 0.755
SARC_06359
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.749
SARC_11708
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
  0.745
SARC_08622
26S proteasome non-ATPase regulatory subunit 14.
    
  0.735
SARC_07055
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.719
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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