STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_15612HGTP_anticodon domain-containing protein. (145 aa)    
Predicted Functional Partners:
SARC_07302
50S ribosomal protein L15.
   
 
 0.816
SARC_13844
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.798
SARC_03942
Tr-type G domain-containing protein.
  
 0.787
SARC_03571
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.767
SARC_13864
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.765
SARC_10535
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.763
SARC_03357
50S ribosomal protein L1.
   
 
 0.753
SARC_04030
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.736
SARC_01357
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.736
SARC_17029
50S ribosomal protein L27.
  
 
 0.714
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.