STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_15425VPS37 C-terminal domain-containing protein. (116 aa)    
Predicted Functional Partners:
SARC_16403
VPS28 N-terminal domain-containing protein; Belongs to the VPS28 family.
    
 0.983
SARC_10826
VPS28 C-terminal domain-containing protein; Belongs to the VPS28 family.
    
 0.983
SARC_16967
UEV domain-containing protein.
    
 0.978
SARC_00519
UEV domain-containing protein.
    
 0.978
SARC_08382
Uncharacterized protein.
    
 0.911
SARC_09865
Uncharacterized protein.
     
 0.891
SARC_04418
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
 0.891
SARC_11033
Uncharacterized protein.
    
 0.851
SARC_02917
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
     
 0.827
SARC_13121
Uncharacterized protein.
     
 0.819
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.