STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_15384Rab-GAP TBC domain-containing protein. (133 aa)    
Predicted Functional Partners:
SARC_09317
Ras-like protein Rab-11B.
    
 0.695
SARC_06935
Ras-like protein Rab-11B.
    
 0.695
SARC_05459
ULK/ULK protein kinase.
    
  0.673
SARC_17482
Protein kinase domain-containing protein.
    
  0.646
SARC_08953
Uncharacterized protein.
    
 
 0.572
SARC_07742
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.561
SARC_01904
TPR_REGION domain-containing protein.
    
 
 0.533
SARC_03326
Uncharacterized protein.
    
 
 0.515
SARC_02380
Uncharacterized protein.
   
   0.509
SARC_15325
Uncharacterized protein.
    
 0.415
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.