STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_14862WD_REPEATS_REGION domain-containing protein. (104 aa)    
Predicted Functional Partners:
SARC_08057
Uncharacterized protein.
    
 
 0.935
SARC_02107
Pre-mRNA-processing-splicing factor 8.
    
   0.914
SARC_17357
DUF1604 domain-containing protein.
    
 
 0.911
SARC_00542
Uncharacterized protein.
   
 0.732
SARC_12420
Protein kinase domain-containing protein.
    
 0.662
SARC_08214
TKL/RAF/RAF protein kinase.
    
 0.662
SARC_13554
Protein kinase domain-containing protein.
    
 0.645
SARC_05006
STE/STE7 protein kinase; Belongs to the protein kinase superfamily.
    
 0.645
SARC_02788
STE/STE7/MEK1 protein kinase.
    
 0.645
SARC_04880
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
   0.593
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.