Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SARC_01148 | SARC_03262 | A0A0L0GEP6 | A0A0L0G6K7 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.975 |
SARC_01148 | SARC_03285 | A0A0L0GEP6 | A0A0L0G6K2 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.999 |
SARC_01148 | SARC_05716 | A0A0L0GEP6 | A0A0L0FYR2 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | CP-type G domain-containing protein. | 0.999 |
SARC_01148 | SARC_05907 | A0A0L0GEP6 | A0A0L0FY71 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.994 |
SARC_01148 | SARC_06780 | A0A0L0GEP6 | A0A0L0FWD4 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.998 |
SARC_01148 | SARC_07454 | A0A0L0GEP6 | A0A0L0FTN4 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.995 |
SARC_01148 | SARC_07896 | A0A0L0GEP6 | A0A0L0FT15 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
SARC_01148 | SARC_10163 | A0A0L0GEP6 | A0A0L0FLL6 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.987 |
SARC_01148 | SARC_12854 | A0A0L0GEP6 | A0A0L0FCX1 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein RLP24. | 0.995 |
SARC_01148 | SARC_14341 | A0A0L0GEP6 | A0A0L0F997 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.961 |
SARC_03262 | SARC_01148 | A0A0L0G6K7 | A0A0L0GEP6 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.975 |
SARC_03262 | SARC_03285 | A0A0L0G6K7 | A0A0L0G6K2 | Uncharacterized protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.976 |
SARC_03262 | SARC_05716 | A0A0L0G6K7 | A0A0L0FYR2 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.989 |
SARC_03262 | SARC_06780 | A0A0L0G6K7 | A0A0L0FWD4 | Uncharacterized protein. | Uncharacterized protein. | 0.983 |
SARC_03262 | SARC_07454 | A0A0L0G6K7 | A0A0L0FTN4 | Uncharacterized protein. | Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. | 0.983 |
SARC_03262 | SARC_07896 | A0A0L0G6K7 | A0A0L0FT15 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.980 |
SARC_03262 | SARC_10163 | A0A0L0G6K7 | A0A0L0FLL6 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.977 |
SARC_03262 | SARC_12854 | A0A0L0G6K7 | A0A0L0FCX1 | Uncharacterized protein. | Ribosome biogenesis protein RLP24. | 0.975 |
SARC_03262 | SARC_14341 | A0A0L0G6K7 | A0A0L0F997 | Uncharacterized protein. | Uncharacterized protein. | 0.945 |
SARC_03285 | SARC_01148 | A0A0L0G6K2 | A0A0L0GEP6 | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.999 |
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