STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_13922Uncharacterized protein. (96 aa)    
Predicted Functional Partners:
SARC_03882
Uncharacterized protein.
   
 0.714
SARC_12977
Uncharacterized protein.
   
 0.640
SARC_05188
Uncharacterized protein.
    
 0.619
SARC_04519
Uncharacterized protein.
    
 0.619
SARC_08622
26S proteasome non-ATPase regulatory subunit 14.
    
  0.574
SARC_08917
Cytochrome b5 heme-binding domain-containing protein.
   
 0.568
SARC_17631
I/LWEQ domain-containing protein.
    
 0.562
SARC_04742
ENTH domain-containing protein.
    
 0.562
SARC_06639
Uncharacterized protein.
   
 0.550
SARC_02285
ANK_REP_REGION domain-containing protein.
    
 0.550
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.