STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_14223Uncharacterized protein. (58 aa)    
Predicted Functional Partners:
SARC_09317
Ras-like protein Rab-11B.
    
 0.928
SARC_06935
Ras-like protein Rab-11B.
    
 0.928
SARC_01495
Calcium-binding protein NCS-1.
    
 
 0.919
SARC_01285
GOLD domain-containing protein.
    
 
 0.910
SARC_15325
Uncharacterized protein.
    
 0.790
SARC_09216
ADP-ribosylation factor 1-like 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.790
SARC_03502
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.790
SARC_09059
SAC domain-containing protein.
    
 0.787
SARC_00679
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.778
SARC_00810
Uncharacterized protein.
     
 0.759
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.