STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_13507Uncharacterized protein. (338 aa)    
Predicted Functional Partners:
SARC_16778
Uncharacterized protein.
   
 0.851
SARC_12898
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.851
SARC_06856
Uncharacterized protein.
   
 0.851
SARC_03749
Uncharacterized protein.
   
 0.851
SARC_10317
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.801
SARC_08460
Skp1 domain-containing protein.
    
 
 0.801
SARC_03408
Cytochrome b5 heme-binding domain-containing protein.
     
 0.755
SARC_11912
BZIP domain-containing protein.
    
 
 0.737
SARC_13839
Elongation of fatty acids protein.
    
 0.701
SARC_07604
Elongation of fatty acids protein.
    
 0.701
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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