STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_13425MUTSd domain-containing protein. (321 aa)    
Predicted Functional Partners:
SARC_07908
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 
 0.974
SARC_11194
Uncharacterized protein.
   
 0.967
SARC_01519
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.967
SARC_13915
Uncharacterized protein.
    
 0.966
SARC_07637
DNA_MISMATCH_REPAIR_2 domain-containing protein.
    
 0.966
SARC_17132
Uncharacterized protein.
   
 0.932
SARC_03122
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
 0.932
SARC_07638
Uncharacterized protein.
    
 0.906
SARC_03123
Uncharacterized protein.
    
 0.906
SARC_16211
Uncharacterized protein.
  
 0.875
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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