STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_13366Helicase C-terminal domain-containing protein. (54 aa)    
Predicted Functional Partners:
SARC_02443
DH domain-containing protein.
    
  0.990
SARC_00928
Uncharacterized protein.
    
  0.990
SARC_09831
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.857
SARC_08653
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.789
SARC_10568
Uncharacterized protein.
   
 0.784
SARC_07911
Pre-mRNA-processing factor 17.
    
 0.768
SARC_11813
CBF domain-containing protein.
   
  0.750
SARC_09219
Uncharacterized protein.
  
 0.741
SARC_07174
Sas10 domain-containing protein.
   
 0.738
SARC_11796
WD_REPEATS_REGION domain-containing protein.
   
  0.732
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.