STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_13334ORC4_C domain-containing protein. (256 aa)    
Predicted Functional Partners:
SARC_05888
AAA_16 domain-containing protein.
   
 0.998
SARC_10379
CDT1 domain-containing protein.
   
 0.997
SARC_04400
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 0.997
SARC_00494
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
 0.997
SARC_09779
DNA helicase; Belongs to the MCM family.
   
 0.996
SARC_17241
Uncharacterized protein.
   
 0.990
SARC_15404
Uncharacterized protein.
   
 0.990
SARC_12493
Uncharacterized protein.
   
 0.989
SARC_02261
Origin recognition complex (ORC) subunit 3.
   
 0.989
SARC_00493
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
 0.985
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
Server load: low (26%) [HD]