STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_12820Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (458 aa)    
Predicted Functional Partners:
SARC_01115
Uncharacterized protein.
    
 0.910
SARC_09856
O-acetylhomoserine (Thiol)-lyase.
 
 0.888
SARC_07203
Flavodoxin-like domain-containing protein.
  
 
 0.873
SARC_01635
Cystathionine gamma-lyase.
 
 0.850
SARC_05319
Cystathionine gamma-synthase.
 
 0.844
SARC_00807
Cystathionine beta-lyase, chloroplastic.
 
 0.844
SARC_02686
Uncharacterized protein.
 
 0.840
SARC_03524
Adenosylhomocysteinase.
  
 0.837
SARC_12713
Uncharacterized protein.
 
 0.835
SARC_12150
Mac domain-containing protein.
   
 0.827
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.