Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SARC_02235 | SARC_02584 | A0A0L0GBH0 | A0A0L0G8K1 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | PHD-type domain-containing protein. | 0.997 |
| SARC_02235 | SARC_04724 | A0A0L0GBH0 | A0A0L0G2E7 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Uncharacterized protein. | 0.915 |
| SARC_02235 | SARC_04897 | A0A0L0GBH0 | A0A0L0G1W9 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | TATA-box-binding protein 2. | 0.993 |
| SARC_02235 | SARC_05635 | A0A0L0GBH0 | A0A0L0FZR3 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | TFIIB-type domain-containing protein. | 0.994 |
| SARC_02235 | SARC_05854 | A0A0L0GBH0 | A0A0L0FYZ4 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | TFIIF_beta domain-containing protein. | 0.997 |
| SARC_02235 | SARC_11358 | A0A0L0GBH0 | A0A0L0FI50 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | TFIIE domain-containing protein. | 0.994 |
| SARC_02235 | SARC_11483 | A0A0L0GBH0 | A0A0L0FHR0 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Cyclin_C_2 domain-containing protein. | 0.971 |
| SARC_02235 | SARC_12280 | A0A0L0GBH0 | A0A0L0FEJ9 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Ssl1 domain-containing protein. | 0.991 |
| SARC_02235 | SARC_12642 | A0A0L0GBH0 | A0A0L0FFJ3 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.992 |
| SARC_02235 | SARC_14452 | A0A0L0GBH0 | A0A0L0F8V7 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.994 |
| SARC_02584 | SARC_02235 | A0A0L0G8K1 | A0A0L0GBH0 | PHD-type domain-containing protein. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.997 |
| SARC_02584 | SARC_04897 | A0A0L0G8K1 | A0A0L0G1W9 | PHD-type domain-containing protein. | TATA-box-binding protein 2. | 0.999 |
| SARC_02584 | SARC_05635 | A0A0L0G8K1 | A0A0L0FZR3 | PHD-type domain-containing protein. | TFIIB-type domain-containing protein. | 0.998 |
| SARC_02584 | SARC_05854 | A0A0L0G8K1 | A0A0L0FYZ4 | PHD-type domain-containing protein. | TFIIF_beta domain-containing protein. | 0.999 |
| SARC_02584 | SARC_11358 | A0A0L0G8K1 | A0A0L0FI50 | PHD-type domain-containing protein. | TFIIE domain-containing protein. | 0.912 |
| SARC_02584 | SARC_11483 | A0A0L0G8K1 | A0A0L0FHR0 | PHD-type domain-containing protein. | Cyclin_C_2 domain-containing protein. | 0.914 |
| SARC_02584 | SARC_12280 | A0A0L0G8K1 | A0A0L0FEJ9 | PHD-type domain-containing protein. | Ssl1 domain-containing protein. | 0.993 |
| SARC_02584 | SARC_12642 | A0A0L0G8K1 | A0A0L0FFJ3 | PHD-type domain-containing protein. | General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.989 |
| SARC_02584 | SARC_14452 | A0A0L0G8K1 | A0A0L0F8V7 | PHD-type domain-containing protein. | Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. | 0.981 |
| SARC_04724 | SARC_02235 | A0A0L0G2E7 | A0A0L0GBH0 | Uncharacterized protein. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.915 |
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