STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_11141Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (275 aa)    
Predicted Functional Partners:
SARC_02316
60S ribosomal protein.
 
 
 
  0.960
SARC_05259
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.932
SARC_03269
Ribosomal_L14e domain-containing protein.
   
 
 0.731
SARC_03149
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.695
SARC_01522
Ribosomal protein L28e.
   
   0.683
SARC_03176
60S ribosomal protein L8.
   
 
 0.680
SARC_02347
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.677
SARC_11846
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
   0.673
SARC_01012
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.672
SARC_02500
Large subunit ribosomal protein L6e.
   
 
 0.670
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.