Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SARC_00918 | SARC_00926 | A0A0L0GFB9 | A0A0L0GDE0 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Triosephosphate isomerase. | 0.955 |
SARC_00918 | SARC_02882 | A0A0L0GFB9 | A0A0L0G9I6 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | C2H2-type domain-containing protein. | 0.796 |
SARC_00918 | SARC_07044 | A0A0L0GFB9 | A0A0L0FUT1 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.944 |
SARC_00918 | SARC_09362 | A0A0L0GFB9 | A0A0L0FN40 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.911 |
SARC_00918 | SARC_10611 | A0A0L0GFB9 | A0A0L0FJE0 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Phosphoglycerate kinase. | 0.874 |
SARC_00918 | SARC_10703 | A0A0L0GFB9 | A0A0L0FJ58 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 6PF2K domain-containing protein. | 0.785 |
SARC_00918 | SARC_11470 | A0A0L0GFB9 | A0A0L0FGW4 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | 0.951 |
SARC_00918 | SARC_12582 | A0A0L0GFB9 | A0A0L0FEH1 | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | Fructose-bisphosphate aldolase class 2. | 0.912 |
SARC_00926 | SARC_00918 | A0A0L0GDE0 | A0A0L0GFB9 | Triosephosphate isomerase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.955 |
SARC_00926 | SARC_02882 | A0A0L0GDE0 | A0A0L0G9I6 | Triosephosphate isomerase. | C2H2-type domain-containing protein. | 0.937 |
SARC_00926 | SARC_05717 | A0A0L0GDE0 | A0A0L0G1A6 | Triosephosphate isomerase. | Phosphoserine aminotransferase, chloroplastic. | 0.473 |
SARC_00926 | SARC_07044 | A0A0L0GDE0 | A0A0L0FUT1 | Triosephosphate isomerase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.988 |
SARC_00926 | SARC_09362 | A0A0L0GDE0 | A0A0L0FN40 | Triosephosphate isomerase. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.859 |
SARC_00926 | SARC_10611 | A0A0L0GDE0 | A0A0L0FJE0 | Triosephosphate isomerase. | Phosphoglycerate kinase. | 0.998 |
SARC_00926 | SARC_10703 | A0A0L0GDE0 | A0A0L0FJ58 | Triosephosphate isomerase. | 6PF2K domain-containing protein. | 0.755 |
SARC_00926 | SARC_11470 | A0A0L0GDE0 | A0A0L0FGW4 | Triosephosphate isomerase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. | 0.834 |
SARC_00926 | SARC_12582 | A0A0L0GDE0 | A0A0L0FEH1 | Triosephosphate isomerase. | Fructose-bisphosphate aldolase class 2. | 0.989 |
SARC_02882 | SARC_00918 | A0A0L0G9I6 | A0A0L0GFB9 | C2H2-type domain-containing protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.796 |
SARC_02882 | SARC_00926 | A0A0L0G9I6 | A0A0L0GDE0 | C2H2-type domain-containing protein. | Triosephosphate isomerase. | 0.937 |
SARC_02882 | SARC_05717 | A0A0L0G9I6 | A0A0L0G1A6 | C2H2-type domain-containing protein. | Phosphoserine aminotransferase, chloroplastic. | 0.580 |
page 1 of 5