STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_10724Isochorismatase domain-containing protein. (149 aa)    
Predicted Functional Partners:
SARC_10432
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.823
SARC_04643
Uncharacterized protein.
   
 0.775
SARC_01468
AB hydrolase-1 domain-containing protein.
  
 0.770
SARC_01466
AB hydrolase-1 domain-containing protein.
  
 0.770
SARC_12977
Uncharacterized protein.
  
 0.764
SARC_01115
Uncharacterized protein.
  
 
 0.758
SARC_13739
IU_nuc_hydro domain-containing protein.
     
 0.726
SARC_08582
IU_nuc_hydro domain-containing protein.
     
 0.726
SARC_01116
Glutamine amidotransferase type-1 domain-containing protein.
    
 0.714
SARC_10847
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
  0.711
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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