STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_10183Tr-type G domain-containing protein. (671 aa)    
Predicted Functional Partners:
SARC_11056
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.911
SARC_03270
60S ribosomal protein L5.
   
 
 0.910
SARC_06142
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.908
SARC_02351
30S ribosomal protein S6.
   
 
 0.908
SARC_01357
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.906
SARC_11193
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.905
SARC_08112
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.905
SARC_04030
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.905
SARC_07853
40S ribosomal protein S3-B.
   
 
 0.903
SARC_05190
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
 
 0.902
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.