STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_09953Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family. (309 aa)    
Predicted Functional Partners:
SARC_10393
Eukaryotic translation initiation factor 5A.
  
 0.944
SARC_03614
eIF-5a domain-containing protein.
  
 0.944
SARC_00348
Deoxyhypusine synthase.
   
 0.913
SARC_10500
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.815
SARC_06446
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
   
 
 0.813
SARC_00926
Triosephosphate isomerase.
     
 0.783
SARC_15760
OTCace_N domain-containing protein.
   
 
 0.762
SARC_07423
OTCace_N domain-containing protein.
   
 
 0.762
SARC_07424
OTCace domain-containing protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 
 0.762
SARC_12517
Uncharacterized protein.
   
 
  0.744
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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