STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_09658V-SNARE coiled-coil homology domain-containing protein. (892 aa)    
Predicted Functional Partners:
SARC_14986
SynN domain-containing protein.
    
 0.956
SARC_10504
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.956
SARC_05834
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.956
SARC_03759
Uncharacterized protein.
    
 
 0.946
SARC_17158
Guanylate kinase-like domain-containing protein.
    
 0.835
SARC_03919
t-SNARE coiled-coil homology domain-containing protein.
    
 0.821
SARC_01268
Uncharacterized protein.
    
 0.821
SARC_02213
Uncharacterized protein.
   
 
 0.743
SARC_11889
t-SNARE coiled-coil homology domain-containing protein.
    
 0.711
SARC_14157
Uncharacterized protein.
     
 0.668
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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