STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_09577Uncharacterized protein. (686 aa)    
Predicted Functional Partners:
SARC_08343
Vps16_N domain-containing protein.
    
 0.994
SARC_06412
Pep3_Vps18 domain-containing protein.
    
 0.994
SARC_04565
Vps39_2 domain-containing protein.
   
 0.994
SARC_11554
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.972
SARC_11555
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.972
SARC_10296
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.972
SARC_01960
Uncharacterized protein.
    
 
 0.972
SARC_01028
Uncharacterized protein.
    
 
 0.971
SARC_18194
Uncharacterized protein.
   
 0.970
SARC_18105
Uncharacterized protein.
   
 0.970
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.