STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_09558Uncharacterized protein; Belongs to the RNA polymerase beta chain family. (926 aa)    
Predicted Functional Partners:
SARC_08015
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.997
SARC_05274
Uncharacterized protein.
   
 0.992
SARC_11976
Uncharacterized protein.
   
 0.990
SARC_13705
DNA-directed RNA polymerase, alpha subunit, N terminal domain-containing protein.
  
 0.988
SARC_11304
DNA-directed RNA polymerase I, II, and III subunit RPABC2.
  
 0.988
SARC_07072
Uncharacterized protein.
   
 0.982
SARC_07058
RNA_pol_L_2 domain-containing protein.
   
 0.979
SARC_07973
Uncharacterized protein.
  
 0.978
SARC_01089
DNA-directed RNA polymerase I, II, and III subunit RPABC1.
  
 0.978
SARC_15685
Uncharacterized protein.
   
 0.968
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.