STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_09107Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
SARC_03949
PPIase cyclophilin-type domain-containing protein.
   
 0.977
SARC_10032
Cir_N domain-containing protein.
   
 0.968
SARC_06337
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
    
 0.968
SARC_02053
Uncharacterized protein.
   
 0.968
SARC_14155
Uncharacterized protein.
    
 0.967
SARC_07911
Pre-mRNA-processing factor 17.
   
 0.967
SARC_02604
Cwf21 domain-containing protein.
    
 0.967
SARC_05615
Slu7 domain-containing protein.
   
 0.958
SARC_00185
Uncharacterized protein.
   
 0.958
SARC_10876
Uncharacterized protein.
    
  0.953
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.