STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08869S-adenosylmethionine decarboxylase proenzyme. (354 aa)    
Predicted Functional Partners:
SARC_04847
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 
 0.886
SARC_07943
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
     
 0.828
SARC_09503
Spermidine synthase.
    
 0.809
SARC_01626
PABS domain-containing protein.
    
 0.809
SARC_12139
Aminotran_1_2 domain-containing protein.
     
 0.787
SARC_07106
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.744
SARC_05849
Ornithine aminotransferase.
     
 0.744
SARC_06960
Tyrosine aminotransferase.
     
 0.737
SARC_05276
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
     
 0.696
SARC_12431
Cytosine-specific methyltransferase.
     
 0.690
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.