STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08659Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
SARC_03003
Developmentally-regulated GTP-binding protein 1.
   
 
 0.989
SARC_02203
Developmentally-regulated GTP-binding protein 2.
   
 
 0.960
SARC_04403
Uncharacterized protein.
   
 
 0.947
SARC_05259
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.942
SARC_03270
60S ribosomal protein L5.
   
   0.913
SARC_10711
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
   0.904
SARC_03529
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.904
SARC_04773
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
   0.897
SARC_00927
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.897
SARC_01012
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
   0.897
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.