STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08733Uncharacterized protein. (1336 aa)    
Predicted Functional Partners:
SARC_02443
DH domain-containing protein.
   
 0.999
SARC_00928
Uncharacterized protein.
   
 0.999
SARC_10838
NAK protein kinase.
   
 0.991
SARC_08715
Uncharacterized protein.
   
 0.991
SARC_08642
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.899
SARC_18161
WW domain-containing protein.
    
 0.875
SARC_04513
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.847
SARC_01128
Serine/threonine-protein kinase PLK.
   
 0.845
SARC_08653
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.838
SARC_06831
ENTH domain-containing protein.
   
 0.825
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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