STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08841Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
SARC_10317
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.959
SARC_08460
Skp1 domain-containing protein.
    
 0.817
SARC_10918
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 
 0.791
SARC_12279
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.776
SARC_08408
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.776
SARC_06475
Uncharacterized protein.
    
 
 0.709
SARC_08781
NEDD8.
    
 0.659
SARC_08090
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.647
SARC_12404
Uncharacterized protein.
    
 0.629
SARC_08012
Uncharacterized protein.
    
 0.629
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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