STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08319Uncharacterized protein. (865 aa)    
Predicted Functional Partners:
SARC_01453
N-alpha-acetyltransferase 11, NatA catalytic subunit.
    
 
 0.983
SARC_15752
Uncharacterized protein.
   
 
 0.962
SARC_00816
N-acetyltransferase domain-containing protein.
   
 
 0.962
SARC_10711
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
   0.874
SARC_00915
60S ribosomal protein L31.
    
   0.862
SARC_00727
60S ribosomal protein L4-A.
    
   0.786
SARC_07051
60S ribosomal protein L35.
    
   0.781
SARC_01748
Uncharacterized protein.
   
   0.774
SARC_00726
60S ribosomal protein L32.
   
   0.763
SARC_03500
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.756
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.