STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08064Uncharacterized protein. (223 aa)    
Predicted Functional Partners:
SARC_03691
CUE domain-containing protein.
    
 0.808
SARC_02426
ANK_REP_REGION domain-containing protein.
    
 0.726
SARC_12651
Uncharacterized protein.
    
 0.710
SARC_01551
Small nuclear ribonucleoprotein Sm D2.
    
 0.710
SARC_00707
Small nuclear ribonucleoprotein-associated protein.
    
 0.703
SARC_04780
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.702
SARC_08424
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.698
SARC_02735
Small nuclear ribonucleoprotein G.
    
  0.692
SARC_13436
Serine/threonine protein kinase.
    
 0.679
SARC_10792
TK protein kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.679
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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