STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08032Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
SARC_11526
Dihydropyrimidinase.
  
 
 0.958
SARC_12456
OMPdecase domain-containing protein.
  
 
 0.922
SARC_12179
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.
  
 
 0.922
SARC_03559
Orotate phosphoribosyltransferase.
  
 
 0.922
SARC_15410
DHO_dh domain-containing protein.
  
 
 0.895
SARC_15664
Uncharacterized protein.
  
 
 0.895
SARC_06824
Uncharacterized protein.
  
 
 0.895
SARC_04295
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.895
SARC_08917
Cytochrome b5 heme-binding domain-containing protein.
  
 
 0.868
SARC_13627
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 
 0.851
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.