STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_07783Uncharacterized protein. (1056 aa)    
Predicted Functional Partners:
SARC_08917
Cytochrome b5 heme-binding domain-containing protein.
    
 0.789
SARC_00056
GP-PDE domain-containing protein.
    
 0.789
SARC_01639
DRIM domain-containing protein.
   
  0.730
SARC_00057
Uncharacterized protein.
    
 0.730
SARC_13528
Uncharacterized protein.
   
 0.713
SARC_12508
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.713
SARC_13627
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.698
SARC_11426
Malate synthase G.
   
 
  0.691
SARC_01772
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.691
SARC_14583
Ribosomal RNA small subunit methyltransferase NEP1.
    
  0.687
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.