STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_07609UmuC domain-containing protein. (246 aa)    
Predicted Functional Partners:
SARC_01519
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.965
SARC_03481
Uncharacterized protein.
   
 0.960
SARC_07024
Uncharacterized protein.
   
 0.785
SARC_07023
DNA_pol_B domain-containing protein.
   
 0.785
SARC_00919
Uncharacterized protein.
   
 0.785
SARC_04740
Ubiquitin-60S ribosomal protein L40, variant.
    
  0.776
SARC_05714
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
  
 0.767
SARC_01880
DNA polymerase.
   
 0.765
SARC_08618
3'-5' exonuclease domain-containing protein.
  
 0.759
SARC_04012
Helicase C-terminal domain-containing protein.
  
 0.759
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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