STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_07768Ins145_P3_rec domain-containing protein. (247 aa)    
Predicted Functional Partners:
SARC_05737
Uncharacterized protein.
 
     0.944
SARC_13774
Uncharacterized protein.
 
     0.936
SARC_11746
Uncharacterized protein.
    
 0.683
SARC_06170
Uncharacterized protein.
    
 0.610
SARC_03524
Adenosylhomocysteinase.
    
 0.602
SARC_16237
Uncharacterized protein.
    
 0.564
SARC_09901
Uncharacterized protein.
    
 0.564
SARC_00302
Uncharacterized protein.
    
 0.506
SARC_00303
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.506
SARC_12204
Uncharacterized protein.
    
 0.471
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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