STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_07616Thiolase_N domain-containing protein. (174 aa)    
Predicted Functional Partners:
SARC_05179
Uncharacterized protein.
  
 0.971
SARC_00193
Uncharacterized protein.
  
 0.961
SARC_12977
Uncharacterized protein.
  
 0.934
SARC_17428
HMG_CoA_synt_N domain-containing protein.
  
 0.910
SARC_10840
Uncharacterized protein.
  
 0.910
SARC_02231
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 0.910
SARC_11426
Malate synthase G.
  
 
 0.890
SARC_05835
Enoyl-CoA hydratase, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.849
SARC_12840
Uncharacterized protein.
  
 0.826
SARC_10295
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.826
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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