STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARC_08224Maleylacetoacetate isomerase; Belongs to the GST superfamily. (217 aa)    
Predicted Functional Partners:
SARC_13615
WHEP-TRS domain-containing protein.
   
 0.951
SARC_02513
Fumarylacetoacetase.
 
 
 0.935
SARC_07474
Homogentisate 1,2-dioxygenase.
 
 
 0.904
SARC_12681
Elongation factor EF-1 alpha subunit.
   
 0.841
SARC_04595
Uncharacterized protein.
   
 
 0.826
SARC_04594
ABC transporter domain-containing protein.
   
 
 0.826
SARC_11000
GST N-terminal domain-containing protein; Belongs to the GST superfamily.
   
 0.810
SARC_08834
Uncharacterized protein.
   
 0.795
SARC_07692
Phospholipid hydroperoxide glutathione peroxidase, mitochondrial.
   
 
 0.788
SARC_06836
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.784
Your Current Organism:
Sphaeroforma arctica
NCBI taxonomy Id: 667725
Other names: S. arctica JP610, Sphaeroforma arctica JP610
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.